Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NUDCD3Q8IVD9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
NUDCD3Q8IVD9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 MIPEPP3-201ENST00000412105 444 ntBASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 OR6D1P-202ENST00000641007 5290 ntBASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NUDCD3Q8IVD9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NUDCD3Q8IVD9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 AC026271.2-201ENST00000428091 497 ntBASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 AC080038.1-201ENST00000611274 1154 ntBASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 AC092368.3-202ENST00000574180 1591 ntBASIC18.68■□□□□ 0.58
NUDCD3Q8IVD9 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AL162430.1-201ENST00000480705 870 ntBASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AC091874.3-201ENST00000512672 1195 ntBASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms