Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS6Q86YV9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HPS6Q86YV9 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.56■□□□□ 0.56
HPS6Q86YV9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS6Q86YV9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 AC020916.1-201ENST00000587762 1774 ntBASIC18.55■□□□□ 0.56
HPS6Q86YV9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 KRT16P5-201ENST00000455284 522 ntBASIC18.55■□□□□ 0.56
HPS6Q86YV9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 AC012306.2-201ENST00000609350 630 ntBASIC18.55■□□□□ 0.56
HPS6Q86YV9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS6Q86YV9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS6Q86YV9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HPS6Q86YV9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.54■□□□□ 0.56
HPS6Q86YV9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HPS6Q86YV9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HPS6Q86YV9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.54■□□□□ 0.56
HPS6Q86YV9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms