Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 KRT16P2-201ENST00000414673 1423 ntBASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 AC120498.10-201ENST00000621827 505 ntBASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KCNIP4Q6PIL6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP4Q6PIL6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 MIR939-201ENST00000401314 82 ntBASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 KRT8P17-201ENST00000453110 1448 ntBASIC14.58□□□□□ -0.08
KCNIP4Q6PIL6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP4Q6PIL6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms