Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MRPL54Q6P161 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MRPL54Q6P161 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MRPL54Q6P161 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.24□□□□□ -0.13
MRPL54Q6P161 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.24□□□□□ -0.13
MRPL54Q6P161 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
MRPL54Q6P161 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MRPL54Q6P161 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 CCDC92B-201ENST00000575506 885 ntBASIC14.23□□□□□ -0.13
MRPL54Q6P161 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 AC012317.2-201ENST00000623305 2251 ntBASIC14.23□□□□□ -0.13
MRPL54Q6P161 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.23□□□□□ -0.13
MRPL54Q6P161 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MRPL54Q6P161 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.22□□□□□ -0.13
MRPL54Q6P161 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 AC012414.1-201ENST00000556676 535 ntBASIC14.22□□□□□ -0.13
MRPL54Q6P161 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 AP001160.3-201ENST00000601484 763 ntBASIC14.22□□□□□ -0.13
MRPL54Q6P161 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 CYP21A1P-202ENST00000354927 1481 ntBASIC14.22□□□□□ -0.13
MRPL54Q6P161 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 AC141586.5-201ENST00000624546 2050 ntBASIC14.22□□□□□ -0.13
MRPL54Q6P161 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MRPL54Q6P161 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MRPL54Q6P161 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MRPL54Q6P161 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms