Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.392e-6■■□□□ 11.6
SRSF1Q07955 UNC45A-214ENST00000556704 1299 ntTSL 512.32□□□□□ -0.442e-6■■□□□ 11.6
SRSF1Q07955 MTMR14-204ENST00000414996 1746 ntTSL 1 (best)12.17□□□□□ -0.462e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.472e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.522e-6■■□□□ 11.6
SRSF1Q07955 EIF4G2-221ENST00000532082 1069 ntTSL 1 (best)11.44□□□□□ -0.582e-6■■□□□ 11.6
SRSF1Q07955 CHPF2-202ENST00000465601 782 ntTSL 311.29□□□□□ -0.62e-6■■□□□ 11.6
SRSF1Q07955 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.622e-6■■□□□ 11.6
SRSF1Q07955 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.09□□□□□ -0.632e-6■■□□□ 11.6
SRSF1Q07955 MTMR14-211ENST00000449543 773 ntTSL 310.91□□□□□ -0.662e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-210ENST00000507352 1306 ntTSL 1 (best)10.85□□□□□ -0.672e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.732e-6■■□□□ 11.6
SRSF1Q07955 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC10.29□□□□□ -0.762e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.792e-6■■□□□ 11.6
SRSF1Q07955 SREBF1-209ENST00000470247 374 ntTSL 59.86□□□□□ -0.832e-6■■□□□ 11.6
SRSF1Q07955 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.92e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.922e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-204ENST00000354691 2498 ntTSL 29.3□□□□□ -0.922e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-209ENST00000368330 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.952e-6■■□□□ 11.6
SRSF1Q07955 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.962e-6■■□□□ 11.6
SRSF1Q07955 SERPINB6-205ENST00000380539 1338 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.992e-6■■□□□ 11.6
SRSF1Q07955 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -12e-6■■□□□ 11.6
SRSF1Q07955 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.012e-6■■□□□ 11.6
SRSF1Q07955 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC8.35□□□□□ -1.072e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC8.16□□□□□ -1.12e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-221ENST00000515155 576 ntTSL 48.05□□□□□ -1.122e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-220ENST00000513837 2590 ntTSL 2 BASIC7.66□□□□□ -1.182e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-207ENST00000504836 2287 ntTSL 27.28□□□□□ -1.242e-6■■□□□ 11.6
SRSF1Q07955 PCMTD1-203ENST00000519559 1204 ntTSL 27.26□□□□□ -1.252e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.272e-6■■□□□ 11.6
SRSF1Q07955 YY1AP1-215ENST00000436865 2684 ntTSL 1 (best)6.93□□□□□ -1.32e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC6.77□□□□□ -1.322e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.352e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-216ENST00000511573 3442 ntTSL 26.58□□□□□ -1.362e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC6.51□□□□□ -1.372e-6■■□□□ 11.6
SRSF1Q07955 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.51□□□□□ -1.372e-6■■□□□ 11.6
SRSF1Q07955 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.29□□□□□ -1.41e-6■■□□□ 11.6
SRSF1Q07955 AC012254.2-202ENST00000602926 291 ntAPPRIS ALT2 TSL 25.53□□□□□ -1.521e-6■■□□□ 11.6
SRSF1Q07955 FUS-204ENST00000483853 778 ntTSL 220.66■□□□□ 0.91e-11■■□□□ 11.6
SRSF1Q07955 HGFAC-203ENST00000509689 1894 ntTSL 517.09■□□□□ 0.331e-6■■□□□ 11.6
SRSF1Q07955 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.96■□□□□ 0.151e-6■■□□□ 11.6
SRSF1Q07955 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.231e-6■■□□□ 11.6
SRSF1Q07955 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.662e-7■■□□□ 11.6
SRSF1Q07955 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.672e-7■■□□□ 11.6
SRSF1Q07955 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC10.46□□□□□ -0.742e-7■■□□□ 11.6
SRSF1Q07955 RNF43-203ENST00000577716 4367 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -12e-7■■□□□ 11.6
SRSF1Q07955 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC8.26□□□□□ -1.092e-7■■□□□ 11.6
SRSF1Q07955 KPNB1-204ENST00000577875 605 ntTSL 35.13□□□□□ -1.597e-9■■□□□ 11.6
SRSF1Q07955 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.56■□□□□ 0.562e-10■■□□□ 11.6
SRSF1Q07955 DHX9-206ENST00000483416 814 ntTSL 515.8■□□□□ 0.124e-8■■□□□ 11.6
SRSF1Q07955 TXNRD2-221ENST00000635155 858 ntTSL 513.8□□□□□ -0.22e-10■■□□□ 11.6
SRSF1Q07955 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.68□□□□□ -0.222e-10■■□□□ 11.6
SRSF1Q07955 TXNRD2-210ENST00000475995 751 ntTSL 513.17□□□□□ -0.32e-10■■□□□ 11.6
SRSF1Q07955 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.314e-8■■□□□ 11.6
SRSF1Q07955 SNHG4-203ENST00000506188 801 ntTSL 413.06□□□□□ -0.326e-11■■□□□ 11.6
SRSF1Q07955 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC12.55□□□□□ -0.46e-11■■□□□ 11.6
SRSF1Q07955 SNHG4-201ENST00000448190 542 ntTSL 412.23□□□□□ -0.456e-11■■□□□ 11.6
SRSF1Q07955 SNHG4-202ENST00000505522 629 ntTSL 1 (best)11.92□□□□□ -0.56e-11■■□□□ 11.6
SRSF1Q07955 SNHG4-206ENST00000508735 310 ntTSL 1 (best)11.92□□□□□ -0.56e-11■■□□□ 11.6
SRSF1Q07955 SNHG4-208ENST00000514110 679 ntTSL 1 (best)11.92□□□□□ -0.56e-11■■□□□ 11.6
SRSF1Q07955 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.34□□□□□ -0.594e-8■■□□□ 11.6
SRSF1Q07955 WDR55-203ENST00000506393 2477 ntTSL 29.91□□□□□ -0.822e-10■■□□□ 11.6
SRSF1Q07955 SNHG4-207ENST00000513259 444 ntTSL 59.08□□□□□ -0.966e-11■■□□□ 11.6
SRSF1Q07955 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.152e-10■■□□□ 11.6
SRSF1Q07955 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.264e-8■■□□□ 11.6
SRSF1Q07955 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.384e-8■■□□□ 11.6
SRSF1Q07955 ZNF117-202ENST00000487644 1837 ntTSL 25.39□□□□□ -1.554e-8■■□□□ 11.6
SRSF1Q07955 DHX9-205ENST00000479271 316 ntTSL 55.32□□□□□ -1.564e-8■■□□□ 11.6
SRSF1Q07955 SNHG4-205ENST00000507692 575 ntTSL 54.63□□□□□ -1.676e-11■■□□□ 11.6
SRSF1Q07955 TXNRD2-211ENST00000484672 429 ntTSL 54.49□□□□□ -1.692e-10■■□□□ 11.6
SRSF1Q07955 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.42□□□□□ -1.74e-8■■□□□ 11.6
SRSF1Q07955 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.734e-8■■□□□ 11.6
SRSF1Q07955 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.064e-8■■□□□ 11.6
SRSF1Q07955 TXNRD2-208ENST00000471835 326 ntTSL 22.07□□□□□ -2.082e-10■■□□□ 11.6
SRSF1Q07955 FAM229A-202ENST00000416512 2759 ntTSL 1 (best)14.73□□□□□ -0.052e-6■■□□□ 11.6
SRSF1Q07955 FAM229A-201ENST00000415596 446 ntTSL 313.69□□□□□ -0.222e-6■■□□□ 11.6
SRSF1Q07955 WDR59-205ENST00000562371 562 ntTSL 29.35□□□□□ -0.912e-7■■□□□ 11.6
SRSF1Q07955 ANKRD17-210ENST00000561029 2717 ntTSL 516.89■□□□□ 0.292e-11■■□□□ 11.6
SRSF1Q07955 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.28□□□□□ -0.122e-11■■□□□ 11.6
SRSF1Q07955 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.222e-11■■□□□ 11.6
SRSF1Q07955 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC9.77□□□□□ -0.852e-11■■□□□ 11.6
SRSF1Q07955 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)5.3□□□□□ -1.562e-11■■□□□ 11.6
SRSF1Q07955 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 14e-7■■□□□ 11.6
SRSF1Q07955 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.144e-7■■□□□ 11.6
SRSF1Q07955 PEG3-207ENST00000599534 5115 ntAPPRIS P1 TSL 1 (best)11.07□□□□□ -0.648e-8■■□□□ 11.6
SRSF1Q07955 COL9A3-204ENST00000463487 760 ntTSL 517.78■□□□□ 0.441e-9■■□□□ 11.6
SRSF1Q07955 SRRM2-221ENST00000574866 638 ntTSL 316.67■□□□□ 0.262e-8■■□□□ 11.6
SRSF1Q07955 SRRM2-218ENST00000574331 1759 ntTSL 214.66□□□□□ -0.062e-8■■□□□ 11.6
SRSF1Q07955 TARDBP-216ENST00000614494 515 ntTSL 57.07□□□□□ -1.283e-13■■□□□ 11.5
SRSF1Q07955 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.763e-7■■□□□ 11.5
SRSF1Q07955 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.763e-7■■□□□ 11.5
SRSF1Q07955 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.32e-6■■□□□ 11.5
SRSF1Q07955 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.192e-6■■□□□ 11.5
SRSF1Q07955 ABO-201ENST00000453660 6341 ntTSL 1 (best)10.69□□□□□ -0.72e-6■■□□□ 11.5
SRSF1Q07955 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)15.3■□□□□ 0.048e-7■■□□□ 11.5
SRSF1Q07955 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.748e-7■■□□□ 11.5
SRSF1Q07955 BPTF-208ENST00000544778 7573 ntTSL 516.85■□□□□ 0.292e-15■■□□□ 11.5
SRSF1Q07955 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.252e-15■■□□□ 11.5
SRSF1Q07955 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.342e-15■■□□□ 11.5
SRSF1Q07955 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC7.71□□□□□ -1.182e-15■■□□□ 11.5
Retrieved 100 of 14,836 protein–RNA pairs in 105.9 ms