RNA–Protein interactions for RNA: ENST00000506393.5

WDR55-203, Transcript of WD repeat domain 55, humanhuman

TSL 2

Gene WDR55, Length 2,477 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR55-203ENST00000506393 NISCHQ9Y2I1 1504 aa26.51■■□□□ 1.83
WDR55-203ENST00000506393 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
WDR55-203ENST00000506393 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
WDR55-203ENST00000506393 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
WDR55-203ENST00000506393 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
WDR55-203ENST00000506393 DCAF8L2P0C7V8 631 aa22.09■■□□□ 1.13
WDR55-203ENST00000506393 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
WDR55-203ENST00000506393 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
WDR55-203ENST00000506393 DCAF1Q9Y4B6 1507 aa21.72■■□□□ 1.07
WDR55-203ENST00000506393 HRCP23327 699 aa21.38■■□□□ 1.01
WDR55-203ENST00000506393 PCGF6Q9BYE7 350 aa21.33■■□□□ 1
WDR55-203ENST00000506393 LOC105371045A0A1W2PR82 267 aa21.22■□□□□ 0.99
WDR55-203ENST00000506393 ABCC9O60706 1549 aa21.19■□□□□ 0.98
WDR55-203ENST00000506393 SCRIBQ14160 1630 aa21.12■□□□□ 0.97
WDR55-203ENST00000506393 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
WDR55-203ENST00000506393 PPARGC1BQ86YN6 1023 aaKnown RBP20.94■□□□□ 0.94
WDR55-203ENST00000506393 TRIM26Q12899 539 aaPredicted RBP20.87■□□□□ 0.93
WDR55-203ENST00000506393 TRIM41Q8WV44 630 aa20.87■□□□□ 0.93
WDR55-203ENST00000506393 RB1CC1Q8TDY2 1594 aa20.84■□□□□ 0.93
WDR55-203ENST00000506393 NACADO15069 1562 aa20.75■□□□□ 0.91
WDR55-203ENST00000506393 FAM9AQ8IZU1 332 aaPredicted RBP20.74■□□□□ 0.91
WDR55-203ENST00000506393 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
WDR55-203ENST00000506393 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
WDR55-203ENST00000506393 EHMT2Q96KQ7 1210 aa20.59■□□□□ 0.89
WDR55-203ENST00000506393 WIZO95785 1651 aa20.54■□□□□ 0.88
WDR55-203ENST00000506393 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
WDR55-203ENST00000506393 BAZ1AQ9NRL2 1556 aaPredicted RBP20.39■□□□□ 0.85
WDR55-203ENST00000506393 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
WDR55-203ENST00000506393 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
WDR55-203ENST00000506393 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
WDR55-203ENST00000506393 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
WDR55-203ENST00000506393 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
WDR55-203ENST00000506393 SMARCA2P51531 1590 aa20.09■□□□□ 0.81
WDR55-203ENST00000506393 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
WDR55-203ENST00000506393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
WDR55-203ENST00000506393 CCER1Q8TC90 406 aaPredicted RBP20■□□□□ 0.79
WDR55-203ENST00000506393 SOGA1O94964 1423 aa19.98■□□□□ 0.79
WDR55-203ENST00000506393 CEP162Q5TB80 1403 aa19.95■□□□□ 0.78
WDR55-203ENST00000506393 TTBK1Q5TCY1 1321 aaPredicted RBP19.95■□□□□ 0.78
WDR55-203ENST00000506393 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
WDR55-203ENST00000506393 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
WDR55-203ENST00000506393 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
WDR55-203ENST00000506393 TNIKQ9UKE5 1360 aa19.91■□□□□ 0.78
WDR55-203ENST00000506393 UBTFP17480 764 aaKnown RBP19.89■□□□□ 0.77
WDR55-203ENST00000506393 EEA1Q15075 1411 aa19.88■□□□□ 0.77
WDR55-203ENST00000506393 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
WDR55-203ENST00000506393 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
WDR55-203ENST00000506393 SCAF1Q9H7N4 1312 aaKnown RBP19.78■□□□□ 0.76
WDR55-203ENST00000506393 GOLGA3Q08378 1498 aa19.77■□□□□ 0.75
WDR55-203ENST00000506393 PEG3Q9GZU2 1588 aa19.73■□□□□ 0.75
WDR55-203ENST00000506393 DIEXFQ68CQ4 756 aaKnown RBP19.66■□□□□ 0.74
WDR55-203ENST00000506393 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
WDR55-203ENST00000506393 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
WDR55-203ENST00000506393 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
WDR55-203ENST00000506393 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
WDR55-203ENST00000506393 KIF21BO75037 1637 aa19.59■□□□□ 0.73
WDR55-203ENST00000506393 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
WDR55-203ENST00000506393 CLIP1P30622 1438 aa19.56■□□□□ 0.72
WDR55-203ENST00000506393 NEUROD1Q13562 356 aa19.53■□□□□ 0.72
WDR55-203ENST00000506393 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
WDR55-203ENST00000506393 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
WDR55-203ENST00000506393 RANGAP1P46060 587 aaPredicted RBP19.49■□□□□ 0.71
WDR55-203ENST00000506393 APLP2Q06481 763 aa19.48■□□□□ 0.71
WDR55-203ENST00000506393 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
WDR55-203ENST00000506393 VPS8Q8N3P4 1428 aa19.48■□□□□ 0.71
WDR55-203ENST00000506393 ZNF316A6NFI3 1004 aaPredicted RBP19.48■□□□□ 0.71
WDR55-203ENST00000506393 CENPBP07199 599 aaPredicted RBP19.47■□□□□ 0.71
WDR55-203ENST00000506393 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
WDR55-203ENST00000506393 GTF3C3Q9Y5Q9 886 aa19.36■□□□□ 0.69
WDR55-203ENST00000506393 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
WDR55-203ENST00000506393 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
WDR55-203ENST00000506393 PRXQ9BXM0 1461 aa19.25■□□□□ 0.67
WDR55-203ENST00000506393 YTHDC1Q96MU7 727 aaKnown RBP19.24■□□□□ 0.67
WDR55-203ENST00000506393 MIER1Q8N108 512 aa19.22■□□□□ 0.67
WDR55-203ENST00000506393 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
WDR55-203ENST00000506393 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
WDR55-203ENST00000506393 CUX1P39880 1505 aa19.2■□□□□ 0.66
WDR55-203ENST00000506393 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
WDR55-203ENST00000506393 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
WDR55-203ENST00000506393 KANK4Q5T7N3 995 aaPredicted RBP19.17■□□□□ 0.66
WDR55-203ENST00000506393 CFTRP13569 1480 aa19.1■□□□□ 0.65
WDR55-203ENST00000506393 DHX57Q6P158 1386 aaKnown RBP19.1■□□□□ 0.65
WDR55-203ENST00000506393 CLSPNQ9HAW4 1339 aa19.09■□□□□ 0.65
WDR55-203ENST00000506393 RRBP1Q9P2E9 1410 aaKnown RBP19.03■□□□□ 0.64
WDR55-203ENST00000506393 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.64
WDR55-203ENST00000506393 CCNB3Q8WWL7 1395 aa18.98■□□□□ 0.63
WDR55-203ENST00000506393 ITGAEP38570 1179 aa18.97■□□□□ 0.63
WDR55-203ENST00000506393 CUX2O14529 1486 aa18.96■□□□□ 0.63
WDR55-203ENST00000506393 IGF1RP08069 1367 aa18.95■□□□□ 0.62
WDR55-203ENST00000506393 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
WDR55-203ENST00000506393 CARMIL1Q5VZK9 1371 aa18.88■□□□□ 0.61
WDR55-203ENST00000506393 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
WDR55-203ENST00000506393 FGD5Q6ZNL6 1462 aa18.85■□□□□ 0.61
WDR55-203ENST00000506393 TIAM1Q13009 1591 aa18.83■□□□□ 0.61
WDR55-203ENST00000506393 RAB3GAP2Q9H2M9 1393 aa18.83■□□□□ 0.6
WDR55-203ENST00000506393 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
WDR55-203ENST00000506393 LRRC9Q6ZRR7 1453 aa18.78■□□□□ 0.6
WDR55-203ENST00000506393 P3H3Q8IVL6 736 aa18.78■□□□□ 0.6
WDR55-203ENST00000506393 ATP1B4Q9UN42 357 aaPredicted RBP18.77■□□□□ 0.59
WDR55-203ENST00000506393 FAM50AQ14320 339 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms