Protein–RNA interactions for Protein: P56915

GSC, Homeobox protein goosecoid, humanhuman

Predicted RBP Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSCP56915 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GSCP56915 AC011270.2-201ENST00000624293 2550 ntBASIC19.9■□□□□ 0.78
GSCP56915 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
GSCP56915 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
GSCP56915 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.9■□□□□ 0.78
GSCP56915 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.9■□□□□ 0.78
GSCP56915 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.9■□□□□ 0.78
GSCP56915 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.9■□□□□ 0.78
GSCP56915 REXO1L10P-201ENST00000615707 1290 ntBASIC19.9■□□□□ 0.78
GSCP56915 REXO1L12P-201ENST00000622156 912 ntBASIC19.9■□□□□ 0.78
GSCP56915 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
GSCP56915 AC068587.9-201ENST00000641814 219 ntBASIC19.9■□□□□ 0.78
GSCP56915 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.9■□□□□ 0.78
GSCP56915 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
GSCP56915 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 KRT8P32-201ENST00000512863 1461 ntBASIC19.9■□□□□ 0.78
GSCP56915 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 HEIH-201ENST00000623091 1652 ntBASIC19.9■□□□□ 0.78
GSCP56915 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GSCP56915 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.9■□□□□ 0.78
GSCP56915 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GSCP56915 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
GSCP56915 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
GSCP56915 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.89■□□□□ 0.77
GSCP56915 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
GSCP56915 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.89■□□□□ 0.77
GSCP56915 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 MIR718-201ENST00000390190 70 ntBASIC19.89■□□□□ 0.77
GSCP56915 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
GSCP56915 AC079598.2-202ENST00000546624 1451 ntBASIC19.89■□□□□ 0.77
GSCP56915 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
GSCP56915 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
GSCP56915 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.89■□□□□ 0.77
GSCP56915 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GSCP56915 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
GSCP56915 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
GSCP56915 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GSCP56915 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
GSCP56915 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.88■□□□□ 0.77
GSCP56915 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.88■□□□□ 0.77
GSCP56915 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.88■□□□□ 0.77
GSCP56915 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.88■□□□□ 0.77
GSCP56915 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.88■□□□□ 0.77
GSCP56915 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.88■□□□□ 0.77
GSCP56915 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.88■□□□□ 0.77
GSCP56915 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.88■□□□□ 0.77
GSCP56915 AC026471.5-201ENST00000615068 467 ntBASIC19.88■□□□□ 0.77
GSCP56915 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
GSCP56915 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GSCP56915 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
GSCP56915 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
GSCP56915 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.88■□□□□ 0.77
GSCP56915 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.87■□□□□ 0.77
GSCP56915 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GSCP56915 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GSCP56915 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GSCP56915 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GSCP56915 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GSCP56915 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
GSCP56915 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GSCP56915 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
GSCP56915 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
GSCP56915 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GSCP56915 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
GSCP56915 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms