Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.03■□□□□ 0.64
WNT3AP56704 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.03■□□□□ 0.64
WNT3AP56704 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
WNT3AP56704 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.03■□□□□ 0.64
WNT3AP56704 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
WNT3AP56704 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
WNT3AP56704 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.02■□□□□ 0.64
WNT3AP56704 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.02■□□□□ 0.64
WNT3AP56704 RCC2P3-201ENST00000418112 1537 ntBASIC19.02■□□□□ 0.64
WNT3AP56704 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
WNT3AP56704 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
WNT3AP56704 MIR1238-201ENST00000408483 83 ntBASIC19.02■□□□□ 0.64
WNT3AP56704 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
WNT3AP56704 CA15P1-201ENST00000481698 905 ntBASIC19.02■□□□□ 0.64
WNT3AP56704 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.02■□□□□ 0.64
WNT3AP56704 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
WNT3AP56704 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
WNT3AP56704 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
WNT3AP56704 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
WNT3AP56704 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
WNT3AP56704 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
WNT3AP56704 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
WNT3AP56704 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
WNT3AP56704 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
WNT3AP56704 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.01■□□□□ 0.63
WNT3AP56704 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.01■□□□□ 0.63
WNT3AP56704 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 MTMR9LP-203ENST00000426597 1545 ntBASIC19.01■□□□□ 0.63
WNT3AP56704 ANO7L1-203ENST00000602586 1720 ntBASIC19.01■□□□□ 0.63
WNT3AP56704 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.01■□□□□ 0.63
WNT3AP56704 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.01■□□□□ 0.63
WNT3AP56704 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.01■□□□□ 0.63
WNT3AP56704 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
WNT3AP56704 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
WNT3AP56704 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
WNT3AP56704 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19■□□□□ 0.63
WNT3AP56704 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19■□□□□ 0.63
WNT3AP56704 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19■□□□□ 0.63
WNT3AP56704 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19■□□□□ 0.63
WNT3AP56704 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19■□□□□ 0.63
WNT3AP56704 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19■□□□□ 0.63
WNT3AP56704 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19■□□□□ 0.63
WNT3AP56704 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
WNT3AP56704 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19■□□□□ 0.63
WNT3AP56704 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19■□□□□ 0.63
WNT3AP56704 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19■□□□□ 0.63
WNT3AP56704 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19■□□□□ 0.63
WNT3AP56704 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.99■□□□□ 0.63
WNT3AP56704 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.99■□□□□ 0.63
WNT3AP56704 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
WNT3AP56704 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.99■□□□□ 0.63
WNT3AP56704 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.99■□□□□ 0.63
WNT3AP56704 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
WNT3AP56704 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.99■□□□□ 0.63
WNT3AP56704 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.99■□□□□ 0.63
WNT3AP56704 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
WNT3AP56704 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.99■□□□□ 0.63
WNT3AP56704 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
WNT3AP56704 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.99■□□□□ 0.63
WNT3AP56704 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
WNT3AP56704 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
WNT3AP56704 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.99■□□□□ 0.63
WNT3AP56704 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.99■□□□□ 0.63
WNT3AP56704 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
WNT3AP56704 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.98■□□□□ 0.63
WNT3AP56704 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
WNT3AP56704 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
WNT3AP56704 AL023284.2-201ENST00000405850 579 ntBASIC18.98■□□□□ 0.63
WNT3AP56704 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.98■□□□□ 0.63
WNT3AP56704 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms