Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
PMS2P54278 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PMS2P54278 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.43■□□□□ 0.7
PMS2P54278 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.43■□□□□ 0.7
PMS2P54278 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.43■□□□□ 0.7
PMS2P54278 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.43■□□□□ 0.7
PMS2P54278 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 AL158047.1-201ENST00000445918 881 ntBASIC19.43■□□□□ 0.7
PMS2P54278 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PMS2P54278 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.43■□□□□ 0.7
PMS2P54278 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.43■□□□□ 0.7
PMS2P54278 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.43■□□□□ 0.7
PMS2P54278 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.43■□□□□ 0.7
PMS2P54278 UNC93B5-201ENST00000530315 699 ntBASIC19.43■□□□□ 0.7
PMS2P54278 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PMS2P54278 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.43■□□□□ 0.7
PMS2P54278 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.43■□□□□ 0.7
PMS2P54278 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.43■□□□□ 0.7
PMS2P54278 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.43■□□□□ 0.7
PMS2P54278 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.43■□□□□ 0.7
PMS2P54278 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.43■□□□□ 0.7
PMS2P54278 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS2P54278 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PMS2P54278 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PMS2P54278 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PMS2P54278 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 AL162741.1-201ENST00000565563 1558 ntBASIC19.42■□□□□ 0.7
PMS2P54278 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PMS2P54278 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.42■□□□□ 0.7
PMS2P54278 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 AC026366.1-201ENST00000488803 879 ntBASIC19.42■□□□□ 0.7
PMS2P54278 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.42■□□□□ 0.7
PMS2P54278 AC142381.4-202ENST00000563973 229 ntBASIC19.42■□□□□ 0.7
PMS2P54278 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
PMS2P54278 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.42■□□□□ 0.7
PMS2P54278 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PMS2P54278 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.42■□□□□ 0.7
PMS2P54278 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS2P54278 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
PMS2P54278 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS2P54278 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS2P54278 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS2P54278 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS2P54278 AP003097.1-201ENST00000530657 1135 ntBASIC19.41■□□□□ 0.7
PMS2P54278 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PMS2P54278 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS2P54278 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PMS2P54278 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PMS2P54278 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.41■□□□□ 0.7
PMS2P54278 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PMS2P54278 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PMS2P54278 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
PMS2P54278 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.4■□□□□ 0.7
PMS2P54278 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
PMS2P54278 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.4■□□□□ 0.7
PMS2P54278 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.4■□□□□ 0.7
PMS2P54278 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms