Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL15A1P39059 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.86■■□□□ 1.41
COL15A1P39059 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.86■■□□□ 1.41
COL15A1P39059 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.86■■□□□ 1.41
COL15A1P39059 LINC00265-3P-201ENST00000447588 903 ntBASIC23.86■■□□□ 1.41
COL15A1P39059 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.86■■□□□ 1.41
COL15A1P39059 EMBP1-201ENST00000458200 901 ntBASIC23.86■■□□□ 1.41
COL15A1P39059 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.86■■□□□ 1.41
COL15A1P39059 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC23.86■■□□□ 1.41
COL15A1P39059 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL15A1P39059 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
COL15A1P39059 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL15A1P39059 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.85■■□□□ 1.41
COL15A1P39059 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL15A1P39059 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
COL15A1P39059 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.85■■□□□ 1.41
COL15A1P39059 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL15A1P39059 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL15A1P39059 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.85■■□□□ 1.41
COL15A1P39059 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
COL15A1P39059 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC23.85■■□□□ 1.41
COL15A1P39059 AC009078.2-202ENST00000463353 338 ntBASIC23.85■■□□□ 1.41
COL15A1P39059 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.85■■□□□ 1.41
COL15A1P39059 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL15A1P39059 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23.85■■□□□ 1.41
COL15A1P39059 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL15A1P39059 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL15A1P39059 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
COL15A1P39059 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
COL15A1P39059 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.84■■□□□ 1.41
COL15A1P39059 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
COL15A1P39059 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC23.84■■□□□ 1.41
COL15A1P39059 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 TOB2P1-201ENST00000469761 992 ntBASIC23.84■■□□□ 1.41
COL15A1P39059 AP000867.3-201ENST00000524675 377 ntBASIC23.84■■□□□ 1.41
COL15A1P39059 PNN-202ENST00000553331 656 ntTSL 3 BASIC23.84■■□□□ 1.41
COL15A1P39059 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 RCC2P3-201ENST00000418112 1537 ntBASIC23.84■■□□□ 1.41
COL15A1P39059 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL15A1P39059 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL15A1P39059 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.84■■□□□ 1.41
COL15A1P39059 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.84■■□□□ 1.41
COL15A1P39059 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
COL15A1P39059 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
COL15A1P39059 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
COL15A1P39059 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
COL15A1P39059 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 UBC-206ENST00000538617 1303 ntTSL 5 BASIC23.83■■□□□ 1.41
COL15A1P39059 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
COL15A1P39059 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC23.83■■□□□ 1.41
COL15A1P39059 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.83■■□□□ 1.41
COL15A1P39059 AC012615.1-201ENST00000565797 1299 ntBASIC23.83■■□□□ 1.41
COL15A1P39059 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
COL15A1P39059 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.83■■□□□ 1.41
COL15A1P39059 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
COL15A1P39059 AL109659.2-201ENST00000606809 1674 ntBASIC23.83■■□□□ 1.41
COL15A1P39059 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL15A1P39059 AL158211.5-201ENST00000623583 2518 ntBASIC23.83■■□□□ 1.41
COL15A1P39059 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL15A1P39059 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL15A1P39059 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
COL15A1P39059 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
COL15A1P39059 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.83■■□□□ 1.4
COL15A1P39059 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL15A1P39059 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
COL15A1P39059 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL15A1P39059 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL15A1P39059 KRT18P23-201ENST00000435622 1283 ntBASIC23.82■■□□□ 1.4
COL15A1P39059 AC079781.3-201ENST00000449110 356 ntBASIC23.82■■□□□ 1.4
COL15A1P39059 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.82■■□□□ 1.4
COL15A1P39059 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.82■■□□□ 1.4
COL15A1P39059 AC010240.3-201ENST00000607688 395 ntBASIC23.82■■□□□ 1.4
COL15A1P39059 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
COL15A1P39059 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms