Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.42■□□□□ 0.54
CDH3P22223 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDH3P22223 ECEL1P2-202ENST00000465689 757 ntBASIC18.42■□□□□ 0.54
CDH3P22223 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH3P22223 PRSS44-201ENST00000515154 1146 ntBASIC18.42■□□□□ 0.54
CDH3P22223 CKBP1-201ENST00000565489 1086 ntBASIC18.42■□□□□ 0.54
CDH3P22223 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH3P22223 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 AC116562.4-202ENST00000641738 218 ntBASIC18.42■□□□□ 0.54
CDH3P22223 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH3P22223 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 TREX1-205ENST00000625293 1783 ntBASIC18.42■□□□□ 0.54
CDH3P22223 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDH3P22223 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH3P22223 SDHAP1-207ENST00000440850 2000 ntBASIC18.42■□□□□ 0.54
CDH3P22223 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDH3P22223 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
CDH3P22223 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 KRT8P11-201ENST00000409686 1436 ntBASIC18.41■□□□□ 0.54
CDH3P22223 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH3P22223 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 AC125437.2-201ENST00000625180 2167 ntBASIC18.41■□□□□ 0.54
CDH3P22223 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CDH3P22223 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH3P22223 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH3P22223 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CDH3P22223 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH3P22223 SLC25A3P1-201ENST00000443844 931 ntBASIC18.41■□□□□ 0.54
CDH3P22223 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH3P22223 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH3P22223 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH3P22223 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CDH3P22223 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH3P22223 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH3P22223 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH3P22223 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH3P22223 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDH3P22223 RCN1P1-201ENST00000400413 996 ntBASIC18.4■□□□□ 0.54
CDH3P22223 AC113347.1-201ENST00000413321 391 ntBASIC18.4■□□□□ 0.54
CDH3P22223 SLC25A1P2-201ENST00000430693 912 ntBASIC18.4■□□□□ 0.54
CDH3P22223 AL137013.1-201ENST00000432946 1228 ntBASIC18.4■□□□□ 0.54
CDH3P22223 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDH3P22223 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.4■□□□□ 0.54
CDH3P22223 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDH3P22223 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDH3P22223 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDH3P22223 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDH3P22223 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH3P22223 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH3P22223 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH3P22223 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH3P22223 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH3P22223 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CDH3P22223 AC005521.1-201ENST00000393351 872 ntBASIC18.39■□□□□ 0.53
CDH3P22223 LIN28AP1-201ENST00000429574 405 ntBASIC18.39■□□□□ 0.53
CDH3P22223 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH3P22223 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH3P22223 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH3P22223 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDH3P22223 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.39■□□□□ 0.53
CDH3P22223 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDH3P22223 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CDH3P22223 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CDH3P22223 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDH3P22223 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CDH3P22223 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms