Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CD58P19256 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CD58P19256 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD58P19256 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD58P19256 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD58P19256 KRT8P3-201ENST00000519669 1449 ntBASIC20.2■□□□□ 0.82
CD58P19256 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CD58P19256 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD58P19256 AC020763.4-201ENST00000623414 4170 ntBASIC20.2■□□□□ 0.82
CD58P19256 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.2■□□□□ 0.82
CD58P19256 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.2■□□□□ 0.82
CD58P19256 AC008622.2-201ENST00000617006 1229 ntBASIC20.2■□□□□ 0.82
CD58P19256 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CD58P19256 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD58P19256 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CD58P19256 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.2■□□□□ 0.82
CD58P19256 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CD58P19256 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD58P19256 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.2■□□□□ 0.82
CD58P19256 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CD58P19256 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD58P19256 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.2■□□□□ 0.82
CD58P19256 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.2■□□□□ 0.82
CD58P19256 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CD58P19256 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.19■□□□□ 0.82
CD58P19256 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CD58P19256 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CD58P19256 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.19■□□□□ 0.82
CD58P19256 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CD58P19256 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 INGX-201ENST00000359239 846 ntBASIC20.19■□□□□ 0.82
CD58P19256 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
CD58P19256 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 AC073912.3-201ENST00000624414 853 ntBASIC20.19■□□□□ 0.82
CD58P19256 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD58P19256 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
CD58P19256 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.18■□□□□ 0.82
CD58P19256 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.18■□□□□ 0.82
CD58P19256 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.18■□□□□ 0.82
CD58P19256 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.18■□□□□ 0.82
CD58P19256 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CD58P19256 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CD58P19256 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD58P19256 AL512353.2-201ENST00000448759 1962 ntBASIC20.17■□□□□ 0.82
CD58P19256 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CD58P19256 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD58P19256 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD58P19256 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.17■□□□□ 0.82
CD58P19256 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD58P19256 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.17■□□□□ 0.82
CD58P19256 SLC25A1P2-201ENST00000430693 912 ntBASIC20.17■□□□□ 0.82
CD58P19256 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.17■□□□□ 0.82
CD58P19256 CA15P1-201ENST00000481698 905 ntBASIC20.17■□□□□ 0.82
CD58P19256 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.17■□□□□ 0.82
CD58P19256 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.17■□□□□ 0.82
CD58P19256 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CD58P19256 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD58P19256 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD58P19256 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD58P19256 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD58P19256 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD58P19256 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD58P19256 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CD58P19256 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD58P19256 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD58P19256 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
CD58P19256 CCR12P-201ENST00000446203 998 ntBASIC20.16■□□□□ 0.82
CD58P19256 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.16■□□□□ 0.82
CD58P19256 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.16■□□□□ 0.82
CD58P19256 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.16■□□□□ 0.82
CD58P19256 AL023803.3-201ENST00000615559 522 ntBASIC20.16■□□□□ 0.82
CD58P19256 AC133561.5-201ENST00000635547 218 ntBASIC20.16■□□□□ 0.82
CD58P19256 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.16■□□□□ 0.82
CD58P19256 LINC01568-207ENST00000641790 1380 ntBASIC20.16■□□□□ 0.82
CD58P19256 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms