Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
KRT4P19013 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
KRT4P19013 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.89■□□□□ 0.62
KRT4P19013 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.89■□□□□ 0.62
KRT4P19013 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT4P19013 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
KRT4P19013 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.89■□□□□ 0.61
KRT4P19013 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.89■□□□□ 0.61
KRT4P19013 AC091874.3-201ENST00000512672 1195 ntBASIC18.89■□□□□ 0.61
KRT4P19013 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 AC022517.1-201ENST00000592429 346 ntBASIC18.89■□□□□ 0.61
KRT4P19013 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT4P19013 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT4P19013 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 AC008764.6-201ENST00000595909 2069 ntBASIC18.89■□□□□ 0.61
KRT4P19013 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT4P19013 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
KRT4P19013 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT4P19013 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT4P19013 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 AC020916.1-201ENST00000587762 1774 ntBASIC18.88■□□□□ 0.61
KRT4P19013 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT4P19013 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
KRT4P19013 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT4P19013 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRT4P19013 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT4P19013 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT4P19013 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT4P19013 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT4P19013 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.88■□□□□ 0.61
KRT4P19013 AL121829.2-201ENST00000620908 328 ntBASIC18.88■□□□□ 0.61
KRT4P19013 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT4P19013 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
KRT4P19013 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT4P19013 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT4P19013 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
KRT4P19013 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 AL499627.1-201ENST00000569373 2188 ntBASIC18.88■□□□□ 0.61
KRT4P19013 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT4P19013 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
KRT4P19013 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT4P19013 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 MIR663A-201ENST00000385250 93 ntBASIC18.87■□□□□ 0.61
KRT4P19013 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KRT4P19013 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT4P19013 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
KRT4P19013 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
KRT4P19013 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT4P19013 TSPY23P-201ENST00000440136 739 ntBASIC18.87■□□□□ 0.61
KRT4P19013 CDCA4P2-201ENST00000441182 718 ntBASIC18.87■□□□□ 0.61
KRT4P19013 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms