Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ATF1P18846 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATF1P18846 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ATF1P18846 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.54■□□□□ 0.24
ATF1P18846 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.54■□□□□ 0.24
ATF1P18846 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.54■□□□□ 0.24
ATF1P18846 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.54■□□□□ 0.24
ATF1P18846 AL109923.1-201ENST00000618799 583 ntBASIC16.54■□□□□ 0.24
ATF1P18846 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ATF1P18846 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
ATF1P18846 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ATF1P18846 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.54■□□□□ 0.24
ATF1P18846 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.54■□□□□ 0.24
ATF1P18846 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ATF1P18846 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
ATF1P18846 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATF1P18846 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATF1P18846 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.53■□□□□ 0.24
ATF1P18846 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATF1P18846 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.53■□□□□ 0.24
ATF1P18846 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.53■□□□□ 0.24
ATF1P18846 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATF1P18846 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.53■□□□□ 0.24
ATF1P18846 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.53■□□□□ 0.24
ATF1P18846 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.53■□□□□ 0.24
ATF1P18846 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.53■□□□□ 0.24
ATF1P18846 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.53■□□□□ 0.24
ATF1P18846 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATF1P18846 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.53■□□□□ 0.24
ATF1P18846 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.53■□□□□ 0.24
ATF1P18846 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.53■□□□□ 0.24
ATF1P18846 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATF1P18846 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ATF1P18846 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATF1P18846 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ATF1P18846 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATF1P18846 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ATF1P18846 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATF1P18846 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATF1P18846 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
ATF1P18846 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.52■□□□□ 0.24
ATF1P18846 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.52■□□□□ 0.24
ATF1P18846 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.52■□□□□ 0.24
ATF1P18846 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATF1P18846 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATF1P18846 AC069152.1-201ENST00000438030 544 ntBASIC16.52■□□□□ 0.24
ATF1P18846 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATF1P18846 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.52■□□□□ 0.24
ATF1P18846 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.52■□□□□ 0.24
ATF1P18846 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
ATF1P18846 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATF1P18846 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ATF1P18846 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.52■□□□□ 0.24
ATF1P18846 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATF1P18846 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.52■□□□□ 0.23
ATF1P18846 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATF1P18846 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ATF1P18846 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.52■□□□□ 0.23
ATF1P18846 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
ATF1P18846 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATF1P18846 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATF1P18846 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.52■□□□□ 0.23
ATF1P18846 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 AL162741.1-201ENST00000565563 1558 ntBASIC16.51■□□□□ 0.23
ATF1P18846 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ATF1P18846 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ATF1P18846 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
ATF1P18846 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATF1P18846 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.51■□□□□ 0.23
ATF1P18846 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms