Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
SCG2P13521 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCG2P13521 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCG2P13521 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.64■■□□□ 1.05
SCG2P13521 AC093503.3-201ENST00000624917 2352 ntBASIC21.64■■□□□ 1.05
SCG2P13521 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCG2P13521 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SCG2P13521 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCG2P13521 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.64■■□□□ 1.05
SCG2P13521 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
SCG2P13521 HMGA1P5-201ENST00000412453 271 ntBASIC21.64■■□□□ 1.05
SCG2P13521 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCG2P13521 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCG2P13521 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCG2P13521 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SCG2P13521 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.64■■□□□ 1.05
SCG2P13521 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SCG2P13521 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.64■■□□□ 1.05
SCG2P13521 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCG2P13521 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCG2P13521 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.63■■□□□ 1.05
SCG2P13521 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCG2P13521 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.63■■□□□ 1.05
SCG2P13521 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
SCG2P13521 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.63■■□□□ 1.05
SCG2P13521 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.63■■□□□ 1.05
SCG2P13521 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.63■■□□□ 1.05
SCG2P13521 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.63■■□□□ 1.05
SCG2P13521 CR769767.2-201ENST00000622735 460 ntBASIC21.63■■□□□ 1.05
SCG2P13521 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCG2P13521 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.63■■□□□ 1.05
SCG2P13521 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCG2P13521 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCG2P13521 AL031598.1-201ENST00000561511 1773 ntBASIC21.63■■□□□ 1.05
SCG2P13521 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
SCG2P13521 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCG2P13521 KRT8P45-201ENST00000414328 1447 ntBASIC21.63■■□□□ 1.05
SCG2P13521 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCG2P13521 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.63■■□□□ 1.05
SCG2P13521 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCG2P13521 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCG2P13521 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SCG2P13521 AL357033.4-201ENST00000617703 1807 ntBASIC21.62■■□□□ 1.05
SCG2P13521 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.62■■□□□ 1.05
SCG2P13521 AC036111.1-201ENST00000533973 1582 ntBASIC21.62■■□□□ 1.05
SCG2P13521 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCG2P13521 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCG2P13521 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.62■■□□□ 1.05
SCG2P13521 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.62■■□□□ 1.05
SCG2P13521 SLC25A3P1-201ENST00000443844 931 ntBASIC21.62■■□□□ 1.05
SCG2P13521 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.62■■□□□ 1.05
SCG2P13521 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.62■■□□□ 1.05
SCG2P13521 MIR3180-5-201ENST00000583743 153 ntBASIC21.62■■□□□ 1.05
SCG2P13521 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.62■■□□□ 1.05
SCG2P13521 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCG2P13521 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCG2P13521 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCG2P13521 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCG2P13521 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCG2P13521 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SCG2P13521 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SCG2P13521 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
SCG2P13521 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.61■■□□□ 1.05
SCG2P13521 TMPOP1-202ENST00000424642 1267 ntBASIC21.61■■□□□ 1.05
SCG2P13521 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.61■■□□□ 1.05
SCG2P13521 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
SCG2P13521 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SCG2P13521 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SCG2P13521 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SCG2P13521 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
SCG2P13521 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.61■■□□□ 1.05
SCG2P13521 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCG2P13521 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.61■■□□□ 1.05
SCG2P13521 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.6■■□□□ 1.05
SCG2P13521 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.6■■□□□ 1.05
SCG2P13521 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SCG2P13521 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.6■■□□□ 1.05
SCG2P13521 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.6■■□□□ 1.05
SCG2P13521 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SCG2P13521 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SCG2P13521 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.6■■□□□ 1.05
SCG2P13521 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms