Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.41■□□□□ 0.38
UBL4AP11441 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.41■□□□□ 0.38
UBL4AP11441 AC011506.1-201ENST00000474329 610 ntBASIC17.41■□□□□ 0.38
UBL4AP11441 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.41■□□□□ 0.38
UBL4AP11441 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.41■□□□□ 0.38
UBL4AP11441 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.41■□□□□ 0.38
UBL4AP11441 Z99916.2-201ENST00000604037 246 ntBASIC17.41■□□□□ 0.38
UBL4AP11441 AC130371.2-201ENST00000619443 611 ntBASIC17.41■□□□□ 0.38
UBL4AP11441 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.41■□□□□ 0.38
UBL4AP11441 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UBL4AP11441 AP006294.2-201ENST00000641667 209 ntBASIC17.41■□□□□ 0.38
UBL4AP11441 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.41■□□□□ 0.38
UBL4AP11441 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.41■□□□□ 0.38
UBL4AP11441 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.41■□□□□ 0.38
UBL4AP11441 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBL4AP11441 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.4■□□□□ 0.38
UBL4AP11441 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.4■□□□□ 0.38
UBL4AP11441 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 AC004408.2-201ENST00000623613 2777 ntBASIC17.4■□□□□ 0.38
UBL4AP11441 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.4■□□□□ 0.38
UBL4AP11441 AL133373.2-201ENST00000623187 2828 ntBASIC17.4■□□□□ 0.38
UBL4AP11441 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.4■□□□□ 0.38
UBL4AP11441 AC006333.2-201ENST00000607957 2099 ntBASIC17.4■□□□□ 0.38
UBL4AP11441 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.4■□□□□ 0.38
UBL4AP11441 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBL4AP11441 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.4■□□□□ 0.38
UBL4AP11441 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.4■□□□□ 0.38
UBL4AP11441 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UBL4AP11441 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
UBL4AP11441 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.4■□□□□ 0.38
UBL4AP11441 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.4■□□□□ 0.38
UBL4AP11441 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.4■□□□□ 0.38
UBL4AP11441 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.4■□□□□ 0.38
UBL4AP11441 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UBL4AP11441 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.4■□□□□ 0.38
UBL4AP11441 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBL4AP11441 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
UBL4AP11441 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.39■□□□□ 0.37
UBL4AP11441 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
UBL4AP11441 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.39■□□□□ 0.37
UBL4AP11441 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.39■□□□□ 0.37
UBL4AP11441 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
UBL4AP11441 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
UBL4AP11441 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBL4AP11441 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
UBL4AP11441 MESTP1-201ENST00000404287 994 ntBASIC17.39■□□□□ 0.37
UBL4AP11441 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.39■□□□□ 0.37
UBL4AP11441 AL355355.2-201ENST00000442321 338 ntBASIC17.39■□□□□ 0.37
UBL4AP11441 AC008040.2-201ENST00000461049 708 ntBASIC17.39■□□□□ 0.37
UBL4AP11441 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.39■□□□□ 0.37
UBL4AP11441 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.39■□□□□ 0.37
UBL4AP11441 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.39■□□□□ 0.37
UBL4AP11441 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.39■□□□□ 0.37
UBL4AP11441 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.39■□□□□ 0.37
UBL4AP11441 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
UBL4AP11441 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBL4AP11441 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBL4AP11441 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
UBL4AP11441 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UBL4AP11441 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms