Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GAPDHP04406 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.76■□□□□ 0.11
GAPDHP04406 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.76■□□□□ 0.11
GAPDHP04406 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.76■□□□□ 0.11
GAPDHP04406 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 AC133681.1-201ENST00000465482 601 ntBASIC15.76■□□□□ 0.11
GAPDHP04406 C1QBPP2-201ENST00000528754 825 ntBASIC15.76■□□□□ 0.11
GAPDHP04406 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.76■□□□□ 0.11
GAPDHP04406 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 ITM2C-210ENST00000620962 501 ntBASIC15.76■□□□□ 0.11
GAPDHP04406 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
GAPDHP04406 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.76■□□□□ 0.11
GAPDHP04406 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.76■□□□□ 0.11
GAPDHP04406 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.76■□□□□ 0.11
GAPDHP04406 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.76■□□□□ 0.11
GAPDHP04406 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GAPDHP04406 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.75■□□□□ 0.11
GAPDHP04406 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.75■□□□□ 0.11
GAPDHP04406 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
GAPDHP04406 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.75■□□□□ 0.11
GAPDHP04406 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.75■□□□□ 0.11
GAPDHP04406 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 KRT16P5-201ENST00000455284 522 ntBASIC15.75■□□□□ 0.11
GAPDHP04406 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GAPDHP04406 AC124016.1-201ENST00000609552 612 ntBASIC15.75■□□□□ 0.11
GAPDHP04406 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.75■□□□□ 0.11
GAPDHP04406 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GAPDHP04406 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.75■□□□□ 0.11
GAPDHP04406 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.75■□□□□ 0.11
GAPDHP04406 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.75■□□□□ 0.11
GAPDHP04406 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
GAPDHP04406 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 BCL2-203ENST00000589955 5011 ntBASIC15.75■□□□□ 0.11
GAPDHP04406 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GAPDHP04406 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
GAPDHP04406 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.74■□□□□ 0.11
GAPDHP04406 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GAPDHP04406 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
GAPDHP04406 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.74■□□□□ 0.11
GAPDHP04406 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.74■□□□□ 0.11
GAPDHP04406 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GAPDHP04406 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.74■□□□□ 0.11
GAPDHP04406 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
GAPDHP04406 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
GAPDHP04406 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.74■□□□□ 0.11
GAPDHP04406 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
GAPDHP04406 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.74■□□□□ 0.11
GAPDHP04406 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GAPDHP04406 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.74■□□□□ 0.11
GAPDHP04406 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms