Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.8■□□□□ 0.92
CD4P01730 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 SDHAP1-207ENST00000440850 2000 ntBASIC20.8■□□□□ 0.92
CD4P01730 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.8■□□□□ 0.92
CD4P01730 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.8■□□□□ 0.92
CD4P01730 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CD4P01730 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.79■□□□□ 0.92
CD4P01730 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.79■□□□□ 0.92
CD4P01730 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.79■□□□□ 0.92
CD4P01730 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.79■□□□□ 0.92
CD4P01730 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CD4P01730 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 AC091304.2-201ENST00000564639 760 ntBASIC20.79■□□□□ 0.92
CD4P01730 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.79■□□□□ 0.92
CD4P01730 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.79■□□□□ 0.92
CD4P01730 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.79■□□□□ 0.92
CD4P01730 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
CD4P01730 AC112497.1-201ENST00000624824 639 ntBASIC20.79■□□□□ 0.92
CD4P01730 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.79■□□□□ 0.92
CD4P01730 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CD4P01730 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.79■□□□□ 0.92
CD4P01730 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.79■□□□□ 0.92
CD4P01730 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.79■□□□□ 0.92
CD4P01730 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD4P01730 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.78■□□□□ 0.92
CD4P01730 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.78■□□□□ 0.92
CD4P01730 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.78■□□□□ 0.92
CD4P01730 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CD4P01730 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.78■□□□□ 0.92
CD4P01730 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.78■□□□□ 0.92
CD4P01730 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.78■□□□□ 0.92
CD4P01730 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.78■□□□□ 0.92
CD4P01730 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.78■□□□□ 0.92
CD4P01730 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.78■□□□□ 0.92
CD4P01730 AL121772.3-201ENST00000610840 674 ntBASIC20.78■□□□□ 0.92
CD4P01730 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CD4P01730 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.78■□□□□ 0.92
CD4P01730 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CD4P01730 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD4P01730 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.77■□□□□ 0.92
CD4P01730 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.77■□□□□ 0.92
CD4P01730 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.77■□□□□ 0.92
CD4P01730 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CD4P01730 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.77■□□□□ 0.92
CD4P01730 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.77■□□□□ 0.92
CD4P01730 LINC00265-3P-201ENST00000447588 903 ntBASIC20.77■□□□□ 0.92
CD4P01730 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.77■□□□□ 0.92
CD4P01730 AP000867.3-201ENST00000524675 377 ntBASIC20.77■□□□□ 0.92
CD4P01730 AC012615.1-201ENST00000565797 1299 ntBASIC20.77■□□□□ 0.92
CD4P01730 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 AC004263.2-201ENST00000617183 678 ntBASIC20.77■□□□□ 0.92
CD4P01730 AC023511.2-201ENST00000618803 211 ntBASIC20.77■□□□□ 0.92
CD4P01730 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.77■□□□□ 0.92
CD4P01730 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CD4P01730 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.77■□□□□ 0.92
CD4P01730 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CD4P01730 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD4P01730 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CD4P01730 KRT8P3-201ENST00000519669 1449 ntBASIC20.77■□□□□ 0.91
CD4P01730 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CD4P01730 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.77■□□□□ 0.91
CD4P01730 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.77■□□□□ 0.91
CD4P01730 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CD4P01730 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CD4P01730 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.76■□□□□ 0.91
CD4P01730 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.76■□□□□ 0.91
CD4P01730 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms