Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
IFNA1P01562 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
IFNA1P01562 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.91□□□□□ -0.02
IFNA1P01562 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
IFNA1P01562 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.91□□□□□ -0.02
IFNA1P01562 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.91□□□□□ -0.02
IFNA1P01562 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.91□□□□□ -0.02
IFNA1P01562 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.91□□□□□ -0.02
IFNA1P01562 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.91□□□□□ -0.02
IFNA1P01562 AC008764.7-201ENST00000593779 1081 ntBASIC14.91□□□□□ -0.02
IFNA1P01562 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.91□□□□□ -0.02
IFNA1P01562 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.91□□□□□ -0.02
IFNA1P01562 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.91□□□□□ -0.02
IFNA1P01562 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.91□□□□□ -0.02
IFNA1P01562 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
IFNA1P01562 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
IFNA1P01562 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
IFNA1P01562 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.9□□□□□ -0.02
IFNA1P01562 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
IFNA1P01562 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
IFNA1P01562 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.9□□□□□ -0.02
IFNA1P01562 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
IFNA1P01562 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
IFNA1P01562 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.9□□□□□ -0.02
IFNA1P01562 AP001160.3-201ENST00000601484 763 ntBASIC14.9□□□□□ -0.02
IFNA1P01562 MIR4466-201ENST00000606121 54 ntBASIC14.9□□□□□ -0.02
IFNA1P01562 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
IFNA1P01562 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
IFNA1P01562 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
IFNA1P01562 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IFNA1P01562 AC012317.2-201ENST00000623305 2251 ntBASIC14.9□□□□□ -0.02
IFNA1P01562 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.9□□□□□ -0.02
IFNA1P01562 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
IFNA1P01562 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
IFNA1P01562 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.89□□□□□ -0.03
IFNA1P01562 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.89□□□□□ -0.03
IFNA1P01562 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.89□□□□□ -0.03
IFNA1P01562 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
IFNA1P01562 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.89□□□□□ -0.03
IFNA1P01562 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 AC099791.1-201ENST00000416440 715 ntBASIC14.89□□□□□ -0.03
IFNA1P01562 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.89□□□□□ -0.03
IFNA1P01562 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.89□□□□□ -0.03
IFNA1P01562 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
IFNA1P01562 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IFNA1P01562 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
IFNA1P01562 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.89□□□□□ -0.03
IFNA1P01562 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.89□□□□□ -0.03
IFNA1P01562 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IFNA1P01562 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
IFNA1P01562 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IFNA1P01562 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms