Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.76■□□□□ 0.43
CLPTM1O96005 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLPTM1O96005 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLPTM1O96005 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 AC016405.3-201ENST00000607710 860 ntBASIC17.76■□□□□ 0.43
CLPTM1O96005 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CLPTM1O96005 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.76■□□□□ 0.43
CLPTM1O96005 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.76■□□□□ 0.43
CLPTM1O96005 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CLPTM1O96005 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPTM1O96005 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CLPTM1O96005 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CLPTM1O96005 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 NCF1B-203ENST00000435988 1254 ntBASIC17.75■□□□□ 0.43
CLPTM1O96005 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPTM1O96005 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPTM1O96005 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.75■□□□□ 0.43
CLPTM1O96005 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPTM1O96005 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.75■□□□□ 0.43
CLPTM1O96005 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CLPTM1O96005 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CLPTM1O96005 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLPTM1O96005 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 AC012317.2-201ENST00000623305 2251 ntBASIC17.74■□□□□ 0.43
CLPTM1O96005 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CLPTM1O96005 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.74■□□□□ 0.43
CLPTM1O96005 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLPTM1O96005 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CLPTM1O96005 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.74■□□□□ 0.43
CLPTM1O96005 HLA-L-209ENST00000420110 1011 ntBASIC17.74■□□□□ 0.43
CLPTM1O96005 AC083906.2-201ENST00000511578 360 ntBASIC17.74■□□□□ 0.43
CLPTM1O96005 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.74■□□□□ 0.43
CLPTM1O96005 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.74■□□□□ 0.43
CLPTM1O96005 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CLPTM1O96005 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CLPTM1O96005 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.73■□□□□ 0.43
CLPTM1O96005 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CLPTM1O96005 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CLPTM1O96005 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms