Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.6■□□□□ 0.41
HCN1O60741 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCN1O60741 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.6■□□□□ 0.41
HCN1O60741 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HCN1O60741 AL138781.2-201ENST00000617896 1843 ntBASIC17.6■□□□□ 0.41
HCN1O60741 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HCN1O60741 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.6■□□□□ 0.41
HCN1O60741 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.59■□□□□ 0.41
HCN1O60741 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.59■□□□□ 0.41
HCN1O60741 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 ZNF815P-204ENST00000434898 1737 ntBASIC17.59■□□□□ 0.41
HCN1O60741 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.59■□□□□ 0.41
HCN1O60741 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.59■□□□□ 0.41
HCN1O60741 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.59■□□□□ 0.41
HCN1O60741 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HCN1O60741 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HCN1O60741 MIR1238-201ENST00000408483 83 ntBASIC17.59■□□□□ 0.41
HCN1O60741 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.59■□□□□ 0.41
HCN1O60741 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.59■□□□□ 0.41
HCN1O60741 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.59■□□□□ 0.41
HCN1O60741 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.59■□□□□ 0.41
HCN1O60741 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.59■□□□□ 0.41
HCN1O60741 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.59■□□□□ 0.41
HCN1O60741 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCN1O60741 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HCN1O60741 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HCN1O60741 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HCN1O60741 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HCN1O60741 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HCN1O60741 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HCN1O60741 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HCN1O60741 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
HCN1O60741 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
HCN1O60741 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HCN1O60741 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 B3GAT3P1-201ENST00000471720 806 ntBASIC17.58■□□□□ 0.4
HCN1O60741 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
HCN1O60741 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
HCN1O60741 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.58■□□□□ 0.4
HCN1O60741 HLA-A-209ENST00000638375 975 ntBASIC17.58■□□□□ 0.4
HCN1O60741 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 AC141586.3-201ENST00000562166 1838 ntBASIC17.58■□□□□ 0.4
HCN1O60741 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
HCN1O60741 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HCN1O60741 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
HCN1O60741 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.57■□□□□ 0.4
HCN1O60741 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HCN1O60741 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 MESTP1-201ENST00000404287 994 ntBASIC17.57■□□□□ 0.4
HCN1O60741 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.57■□□□□ 0.4
HCN1O60741 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.57■□□□□ 0.4
HCN1O60741 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.57■□□□□ 0.4
HCN1O60741 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.57■□□□□ 0.4
HCN1O60741 NAPSB-206ENST00000562112 1266 ntBASIC17.57■□□□□ 0.4
HCN1O60741 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.57■□□□□ 0.4
HCN1O60741 AC145285.6-201ENST00000604632 637 ntBASIC17.57■□□□□ 0.4
HCN1O60741 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
HCN1O60741 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HCN1O60741 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.57■□□□□ 0.4
HCN1O60741 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HCN1O60741 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HCN1O60741 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HCN1O60741 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HCN1O60741 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms