Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.27■□□□□ 0.52
GFRA3O60609 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFRA3O60609 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.27■□□□□ 0.52
GFRA3O60609 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.27■□□□□ 0.52
GFRA3O60609 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.27■□□□□ 0.52
GFRA3O60609 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.27■□□□□ 0.52
GFRA3O60609 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.27■□□□□ 0.52
GFRA3O60609 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.27■□□□□ 0.52
GFRA3O60609 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.27■□□□□ 0.52
GFRA3O60609 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFRA3O60609 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFRA3O60609 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFRA3O60609 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GFRA3O60609 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GFRA3O60609 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
GFRA3O60609 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.27■□□□□ 0.51
GFRA3O60609 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
GFRA3O60609 MCCD1P2-201ENST00000423228 335 ntBASIC18.26■□□□□ 0.51
GFRA3O60609 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
GFRA3O60609 HLA-V-201ENST00000429037 534 ntBASIC18.26■□□□□ 0.51
GFRA3O60609 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.26■□□□□ 0.51
GFRA3O60609 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.26■□□□□ 0.51
GFRA3O60609 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.26■□□□□ 0.51
GFRA3O60609 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.26■□□□□ 0.51
GFRA3O60609 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.26■□□□□ 0.51
GFRA3O60609 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.26■□□□□ 0.51
GFRA3O60609 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GFRA3O60609 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.25■□□□□ 0.51
GFRA3O60609 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
GFRA3O60609 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.25■□□□□ 0.51
GFRA3O60609 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GFRA3O60609 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
GFRA3O60609 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 RCN1P2-201ENST00000398357 915 ntBASIC18.25■□□□□ 0.51
GFRA3O60609 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.25■□□□□ 0.51
GFRA3O60609 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.25■□□□□ 0.51
GFRA3O60609 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.25■□□□□ 0.51
GFRA3O60609 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.25■□□□□ 0.51
GFRA3O60609 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.25■□□□□ 0.51
GFRA3O60609 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.25■□□□□ 0.51
GFRA3O60609 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
GFRA3O60609 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.25■□□□□ 0.51
GFRA3O60609 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.25■□□□□ 0.51
GFRA3O60609 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
GFRA3O60609 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
GFRA3O60609 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GFRA3O60609 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFRA3O60609 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.24■□□□□ 0.51
GFRA3O60609 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFRA3O60609 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFRA3O60609 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GFRA3O60609 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GFRA3O60609 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.24■□□□□ 0.51
GFRA3O60609 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.24■□□□□ 0.51
GFRA3O60609 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.24■□□□□ 0.51
GFRA3O60609 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.24■□□□□ 0.51
GFRA3O60609 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.24■□□□□ 0.51
GFRA3O60609 AC009533.2-201ENST00000543664 586 ntBASIC18.24■□□□□ 0.51
GFRA3O60609 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.24■□□□□ 0.51
GFRA3O60609 MIR4745-201ENST00000577608 62 ntBASIC18.24■□□□□ 0.51
GFRA3O60609 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.24■□□□□ 0.51
GFRA3O60609 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.24■□□□□ 0.51
GFRA3O60609 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GFRA3O60609 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.24■□□□□ 0.51
GFRA3O60609 AC024563.2-201ENST00000603282 481 ntBASIC18.24■□□□□ 0.51
GFRA3O60609 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GFRA3O60609 AC008735.5-201ENST00000623544 497 ntBASIC18.24■□□□□ 0.51
GFRA3O60609 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.24■□□□□ 0.51
GFRA3O60609 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GFRA3O60609 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms