Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.13■□□□□ 0.97
ACTN4O43707 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ACTN4O43707 CKBP1-201ENST00000565489 1086 ntBASIC21.13■□□□□ 0.97
ACTN4O43707 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.13■□□□□ 0.97
ACTN4O43707 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.13■□□□□ 0.97
ACTN4O43707 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.13■□□□□ 0.97
ACTN4O43707 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 AL354751.1-201ENST00000412768 1863 ntBASIC21.13■□□□□ 0.97
ACTN4O43707 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.13■□□□□ 0.97
ACTN4O43707 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.13■□□□□ 0.97
ACTN4O43707 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
ACTN4O43707 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACTN4O43707 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.12■□□□□ 0.97
ACTN4O43707 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.12■□□□□ 0.97
ACTN4O43707 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ACTN4O43707 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ACTN4O43707 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.12■□□□□ 0.97
ACTN4O43707 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
ACTN4O43707 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ACTN4O43707 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 PRORSD1P-201ENST00000295112 541 ntBASIC21.12■□□□□ 0.97
ACTN4O43707 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
ACTN4O43707 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.12■□□□□ 0.97
ACTN4O43707 B3GAT3P1-201ENST00000471720 806 ntBASIC21.12■□□□□ 0.97
ACTN4O43707 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ACTN4O43707 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 AL390961.4-201ENST00000623958 2535 ntBASIC21.12■□□□□ 0.97
ACTN4O43707 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ACTN4O43707 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
ACTN4O43707 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.12■□□□□ 0.97
ACTN4O43707 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.11■□□□□ 0.97
ACTN4O43707 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.11■□□□□ 0.97
ACTN4O43707 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.11■□□□□ 0.97
ACTN4O43707 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.11■□□□□ 0.97
ACTN4O43707 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.11■□□□□ 0.97
ACTN4O43707 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
ACTN4O43707 MIR6786-201ENST00000616843 113 ntBASIC21.11■□□□□ 0.97
ACTN4O43707 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ACTN4O43707 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.11■□□□□ 0.97
ACTN4O43707 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ACTN4O43707 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.11■□□□□ 0.97
ACTN4O43707 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ACTN4O43707 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
ACTN4O43707 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ACTN4O43707 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
ACTN4O43707 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ACTN4O43707 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
ACTN4O43707 FAM201B-201ENST00000458407 597 ntBASIC21.1■□□□□ 0.97
ACTN4O43707 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.1■□□□□ 0.97
ACTN4O43707 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.1■□□□□ 0.97
ACTN4O43707 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.1■□□□□ 0.97
ACTN4O43707 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.1■□□□□ 0.97
ACTN4O43707 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.1■□□□□ 0.97
ACTN4O43707 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms