Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CHD2O14647 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CHD2O14647 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHD2O14647 CCS-201ENST00000310190 942 ntTSL 5 BASIC26.19■■□□□ 1.78
CHD2O14647 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
CHD2O14647 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC26.19■■□□□ 1.78
CHD2O14647 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC26.19■■□□□ 1.78
CHD2O14647 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC26.19■■□□□ 1.78
CHD2O14647 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC26.19■■□□□ 1.78
CHD2O14647 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC26.19■■□□□ 1.78
CHD2O14647 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHD2O14647 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHD2O14647 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD2O14647 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD2O14647 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD2O14647 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHD2O14647 AL353692.3-201ENST00000407031 1396 ntBASIC26.18■■□□□ 1.78
CHD2O14647 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHD2O14647 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD2O14647 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHD2O14647 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CHD2O14647 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC26.18■■□□□ 1.78
CHD2O14647 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC26.18■■□□□ 1.78
CHD2O14647 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC26.18■■□□□ 1.78
CHD2O14647 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC26.18■■□□□ 1.78
CHD2O14647 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD2O14647 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHD2O14647 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD2O14647 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHD2O14647 FABP5-202ENST00000396359 986 ntTSL 5 BASIC26.18■■□□□ 1.78
CHD2O14647 AC010327.4-202ENST00000591484 748 ntBASIC26.18■■□□□ 1.78
CHD2O14647 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC26.18■■□□□ 1.78
CHD2O14647 AC055717.3-201ENST00000622967 595 ntBASIC26.18■■□□□ 1.78
CHD2O14647 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC26.18■■□□□ 1.78
CHD2O14647 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CHD2O14647 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC26.17■■□□□ 1.78
CHD2O14647 TEX21P-204ENST00000641479 1693 ntBASIC26.17■■□□□ 1.78
CHD2O14647 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
CHD2O14647 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHD2O14647 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD2O14647 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD2O14647 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD2O14647 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHD2O14647 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CHD2O14647 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CHD2O14647 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC26.17■■□□□ 1.78
CHD2O14647 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC26.17■■□□□ 1.78
CHD2O14647 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHD2O14647 AC005104.2-201ENST00000427818 678 ntBASIC26.16■■□□□ 1.78
CHD2O14647 AC096582.2-201ENST00000510860 516 ntBASIC26.16■■□□□ 1.78
CHD2O14647 AC034236.2-201ENST00000606662 1610 ntBASIC26.16■■□□□ 1.78
CHD2O14647 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
CHD2O14647 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC26.16■■□□□ 1.78
CHD2O14647 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC26.16■■□□□ 1.78
CHD2O14647 POM121L3P-201ENST00000419331 1163 ntBASIC26.16■■□□□ 1.78
CHD2O14647 HNRNPDP1-201ENST00000439535 754 ntBASIC26.16■■□□□ 1.78
CHD2O14647 MINOS1P3-201ENST00000457048 203 ntBASIC26.16■■□□□ 1.78
CHD2O14647 HOTTIP_1.1-201ENST00000620415 57 ntBASIC26.16■■□□□ 1.78
CHD2O14647 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC26.16■■□□□ 1.78
CHD2O14647 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CHD2O14647 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
CHD2O14647 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC26.15■■□□□ 1.78
CHD2O14647 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD2O14647 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC26.15■■□□□ 1.78
CHD2O14647 CYP51A1P1-201ENST00000492267 1507 ntBASIC26.15■■□□□ 1.78
CHD2O14647 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD2O14647 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD2O14647 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD2O14647 PMS2P2-201ENST00000425039 1128 ntBASIC26.15■■□□□ 1.78
CHD2O14647 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC26.15■■□□□ 1.78
CHD2O14647 FGFR3P6-201ENST00000457012 610 ntBASIC26.15■■□□□ 1.78
CHD2O14647 SCARNA2-201ENST00000458748 420 ntBASIC26.15■■□□□ 1.78
CHD2O14647 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD2O14647 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC26.15■■□□□ 1.78
CHD2O14647 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC26.15■■□□□ 1.78
CHD2O14647 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD2O14647 PAM16-208ENST00000573553 722 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD2O14647 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD2O14647 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CHD2O14647 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC26.15■■□□□ 1.78
CHD2O14647 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC26.15■■□□□ 1.78
CHD2O14647 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
CHD2O14647 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC26.14■■□□□ 1.78
CHD2O14647 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CHD2O14647 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CHD2O14647 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC26.14■■□□□ 1.78
CHD2O14647 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD2O14647 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD2O14647 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC26.14■■□□□ 1.78
CHD2O14647 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD2O14647 IRF8-202ENST00000562492 946 ntTSL 3 BASIC26.14■■□□□ 1.78
CHD2O14647 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC26.14■■□□□ 1.78
CHD2O14647 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CHD2O14647 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CHD2O14647 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
CHD2O14647 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD2O14647 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHD2O14647 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
CHD2O14647 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHD2O14647 HES2-202ENST00000377836 507 ntTSL 2 BASIC26.14■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms