Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PITPNM1O00562 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PITPNM1O00562 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PITPNM1O00562 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PITPNM1O00562 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.52■□□□□ 0.88
PITPNM1O00562 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.52■□□□□ 0.88
PITPNM1O00562 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
PITPNM1O00562 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.52■□□□□ 0.88
PITPNM1O00562 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.52■□□□□ 0.88
PITPNM1O00562 AL390719.2-201ENST00000606993 987 ntBASIC20.52■□□□□ 0.88
PITPNM1O00562 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PITPNM1O00562 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PITPNM1O00562 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.52■□□□□ 0.88
PITPNM1O00562 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PITPNM1O00562 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PITPNM1O00562 RCC2P3-201ENST00000418112 1537 ntBASIC20.52■□□□□ 0.87
PITPNM1O00562 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PITPNM1O00562 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.52■□□□□ 0.87
PITPNM1O00562 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.52■□□□□ 0.87
PITPNM1O00562 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.51■□□□□ 0.87
PITPNM1O00562 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 AL022342.1-201ENST00000400363 863 ntBASIC20.51■□□□□ 0.87
PITPNM1O00562 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PITPNM1O00562 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.51■□□□□ 0.87
PITPNM1O00562 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.51■□□□□ 0.87
PITPNM1O00562 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 AC005332.3-201ENST00000589904 676 ntBASIC20.51■□□□□ 0.87
PITPNM1O00562 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC20.51■□□□□ 0.87
PITPNM1O00562 AL512353.2-201ENST00000448759 1962 ntBASIC20.51■□□□□ 0.87
PITPNM1O00562 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.51■□□□□ 0.87
PITPNM1O00562 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.51■□□□□ 0.87
PITPNM1O00562 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.51■□□□□ 0.87
PITPNM1O00562 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.51■□□□□ 0.87
PITPNM1O00562 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PITPNM1O00562 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.5■□□□□ 0.87
PITPNM1O00562 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PITPNM1O00562 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PITPNM1O00562 AC008556.1-201ENST00000610908 2040 ntBASIC20.5■□□□□ 0.87
PITPNM1O00562 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.5■□□□□ 0.87
PITPNM1O00562 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.5■□□□□ 0.87
PITPNM1O00562 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 AL035696.2-201ENST00000407941 709 ntBASIC20.5■□□□□ 0.87
PITPNM1O00562 AP003733.1-201ENST00000491725 852 ntBASIC20.5■□□□□ 0.87
PITPNM1O00562 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.5■□□□□ 0.87
PITPNM1O00562 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 AP002469.2-201ENST00000531724 424 ntBASIC20.5■□□□□ 0.87
PITPNM1O00562 AL662844.1-201ENST00000546340 181 ntBASIC20.5■□□□□ 0.87
PITPNM1O00562 MIR3180-4-201ENST00000582223 153 ntBASIC20.5■□□□□ 0.87
PITPNM1O00562 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC20.5■□□□□ 0.87
PITPNM1O00562 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PITPNM1O00562 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.5■□□□□ 0.87
PITPNM1O00562 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.5■□□□□ 0.87
PITPNM1O00562 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.5■□□□□ 0.87
PITPNM1O00562 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PITPNM1O00562 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.49■□□□□ 0.87
PITPNM1O00562 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.49■□□□□ 0.87
PITPNM1O00562 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 AC007375.3-201ENST00000600936 2314 ntBASIC20.49■□□□□ 0.87
PITPNM1O00562 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.49■□□□□ 0.87
PITPNM1O00562 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.49■□□□□ 0.87
PITPNM1O00562 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
PITPNM1O00562 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PITPNM1O00562 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.49■□□□□ 0.87
PITPNM1O00562 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.49■□□□□ 0.87
PITPNM1O00562 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.49■□□□□ 0.87
PITPNM1O00562 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.49■□□□□ 0.87
PITPNM1O00562 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.49■□□□□ 0.87
PITPNM1O00562 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.49■□□□□ 0.87
PITPNM1O00562 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 SLC25A6P4-201ENST00000586535 553 ntBASIC20.49■□□□□ 0.87
PITPNM1O00562 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PITPNM1O00562 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.49■□□□□ 0.87
PITPNM1O00562 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.49■□□□□ 0.87
PITPNM1O00562 AC023511.2-201ENST00000618803 211 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms