Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.65■□□□□ 0.58
TLR4O00206 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.65■□□□□ 0.58
TLR4O00206 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.65■□□□□ 0.58
TLR4O00206 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.65■□□□□ 0.58
TLR4O00206 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.65■□□□□ 0.58
TLR4O00206 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.65■□□□□ 0.58
TLR4O00206 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TLR4O00206 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TLR4O00206 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TLR4O00206 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TLR4O00206 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.64■□□□□ 0.57
TLR4O00206 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TLR4O00206 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TLR4O00206 AL023284.2-201ENST00000405850 579 ntBASIC18.64■□□□□ 0.57
TLR4O00206 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TLR4O00206 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.64■□□□□ 0.57
TLR4O00206 RASA4DP-201ENST00000460726 1199 ntBASIC18.64■□□□□ 0.57
TLR4O00206 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.64■□□□□ 0.57
TLR4O00206 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.64■□□□□ 0.57
TLR4O00206 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.64■□□□□ 0.57
TLR4O00206 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TLR4O00206 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.64■□□□□ 0.57
TLR4O00206 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TLR4O00206 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.64■□□□□ 0.57
TLR4O00206 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 AC087289.5-201ENST00000586076 3175 ntBASIC18.63■□□□□ 0.57
TLR4O00206 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.63■□□□□ 0.57
TLR4O00206 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
TLR4O00206 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 HBZP1-201ENST00000354915 429 ntBASIC18.63■□□□□ 0.57
TLR4O00206 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.63■□□□□ 0.57
TLR4O00206 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.63■□□□□ 0.57
TLR4O00206 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.63■□□□□ 0.57
TLR4O00206 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TLR4O00206 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
TLR4O00206 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TLR4O00206 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.63■□□□□ 0.57
TLR4O00206 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.63■□□□□ 0.57
TLR4O00206 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TLR4O00206 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TLR4O00206 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TLR4O00206 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.63■□□□□ 0.57
TLR4O00206 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TLR4O00206 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR4O00206 DUSP5P1-201ENST00000441325 1139 ntBASIC18.62■□□□□ 0.57
TLR4O00206 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.62■□□□□ 0.57
TLR4O00206 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR4O00206 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.62■□□□□ 0.57
TLR4O00206 AC024243.1-201ENST00000609234 778 ntBASIC18.62■□□□□ 0.57
TLR4O00206 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR4O00206 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TLR4O00206 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR4O00206 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TLR4O00206 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR4O00206 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.62■□□□□ 0.57
TLR4O00206 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TLR4O00206 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
TLR4O00206 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TLR4O00206 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.62■□□□□ 0.57
TLR4O00206 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TLR4O00206 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.62■□□□□ 0.57
TLR4O00206 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TLR4O00206 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TLR4O00206 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TLR4O00206 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.61■□□□□ 0.57
TLR4O00206 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 AC036111.1-201ENST00000533973 1582 ntBASIC18.61■□□□□ 0.57
TLR4O00206 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TLR4O00206 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms