Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.44□□□□□ -0.26
LYRM9A8MSI8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LYRM9A8MSI8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYRM9A8MSI8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LYRM9A8MSI8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AC211429.1-201ENST00000415277 523 ntBASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AC012306.2-201ENST00000609350 630 ntBASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AC005363.2-201ENST00000618631 242 ntBASIC13.43□□□□□ -0.26
LYRM9A8MSI8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 AL109659.2-201ENST00000606809 1674 ntBASIC13.43□□□□□ -0.26
LYRM9A8MSI8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.43□□□□□ -0.26
LYRM9A8MSI8 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.42□□□□□ -0.26
LYRM9A8MSI8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 AP000523.1-201ENST00000398242 1049 ntBASIC13.42□□□□□ -0.26
LYRM9A8MSI8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 LIN28AP1-201ENST00000429574 405 ntBASIC13.42□□□□□ -0.26
LYRM9A8MSI8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 ECEL1P2-202ENST00000465689 757 ntBASIC13.42□□□□□ -0.26
LYRM9A8MSI8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 RCC2P3-201ENST00000418112 1537 ntBASIC13.42□□□□□ -0.26
LYRM9A8MSI8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYRM9A8MSI8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.41□□□□□ -0.26
LYRM9A8MSI8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LYRM9A8MSI8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYRM9A8MSI8 AC090340.1-201ENST00000620778 4980 ntBASIC13.41□□□□□ -0.26
LYRM9A8MSI8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYRM9A8MSI8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LYRM9A8MSI8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.41□□□□□ -0.26
LYRM9A8MSI8 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYRM9A8MSI8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.41□□□□□ -0.26
LYRM9A8MSI8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms