Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 KRT19P1-201ENST00000405746 1186 ntBASIC16.32■□□□□ 0.2
HMX3A6NHT5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 IRX1P1-201ENST00000438849 1838 ntBASIC16.32■□□□□ 0.2
HMX3A6NHT5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 KRT18P20-201ENST00000548986 1279 ntBASIC16.32■□□□□ 0.2
HMX3A6NHT5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMX3A6NHT5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 AC011676.5-201ENST00000624864 2660 ntBASIC16.32■□□□□ 0.2
HMX3A6NHT5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HMX3A6NHT5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 NTF6G-201ENST00000591094 616 ntBASIC16.31■□□□□ 0.2
HMX3A6NHT5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.31■□□□□ 0.2
HMX3A6NHT5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.31■□□□□ 0.2
HMX3A6NHT5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMX3A6NHT5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 MST1L-201ENST00000442552 2185 ntBASIC16.3■□□□□ 0.2
HMX3A6NHT5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 CICP6-201ENST00000457191 2729 ntBASIC16.3■□□□□ 0.2
HMX3A6NHT5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 AC034268.1-201ENST00000441047 882 ntBASIC16.3■□□□□ 0.2
HMX3A6NHT5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 AC087623.3-201ENST00000607047 1098 ntBASIC16.3■□□□□ 0.2
HMX3A6NHT5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HMX3A6NHT5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.3■□□□□ 0.2
HMX3A6NHT5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms