Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM49BA6NDI0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM49BA6NDI0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.77■□□□□ 0.91
TRIM49BA6NDI0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM49BA6NDI0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM49BA6NDI0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
TRIM49BA6NDI0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 AC073195.1-201ENST00000607241 877 ntBASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 AL031985.4-201ENST00000642138 673 ntBASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 AC018470.1-201ENST00000624790 3129 ntBASIC20.76■□□□□ 0.91
TRIM49BA6NDI0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 MESTP1-201ENST00000404287 994 ntBASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 B3GAT3P1-201ENST00000471720 806 ntBASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 BICD1-207ENST00000551848 1962 ntBASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 AL390961.4-201ENST00000623958 2535 ntBASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 KRT8P32-201ENST00000512863 1461 ntBASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM49BA6NDI0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 FAM197Y1-201ENST00000421178 764 ntBASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 KRT8P3-201ENST00000519669 1449 ntBASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 AC026271.3-201ENST00000571884 352 ntBASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 AC130371.2-201ENST00000619443 611 ntBASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM49BA6NDI0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM49BA6NDI0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM49BA6NDI0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRIM49BA6NDI0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM49BA6NDI0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TRIM49BA6NDI0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRIM49BA6NDI0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms