Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 UBE2SP1-201ENST00000450587 669 ntBASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 TSPY20P-201ENST00000450910 630 ntBASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 MIR6786-201ENST00000616843 113 ntBASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRBV6-4A0A1B0GX49 KRT8P32-201ENST00000512863 1461 ntBASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 WIZP1-201ENST00000531444 2299 ntBASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 B3GAT3P1-201ENST00000471720 806 ntBASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 AC142381.4-202ENST00000563973 229 ntBASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 MYC-208ENST00000641036 567 ntBASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
TRBV6-4A0A1B0GX49 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV6-4A0A1B0GX49 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms