Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAV21A0A0B4J279 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 BICD1-207ENST00000551848 1962 ntBASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV21A0A0B4J279 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 AC004264.1-201ENST00000608354 794 ntBASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV21A0A0B4J279 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV21A0A0B4J279 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms