Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV8-6A0A0B4J262 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-6A0A0B4J262 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 HLA-G-202ENST00000376815 851 ntBASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 HLA-G-203ENST00000376818 1127 ntBASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 MIPEPP3-201ENST00000412105 444 ntBASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 TSPY6P-201ENST00000448518 926 ntBASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 C2orf69P4-201ENST00000565394 541 ntBASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 CROCCP3-202ENST00000420820 1947 ntBASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 DPP3P2-201ENST00000416030 1696 ntBASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-6A0A0B4J262 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-6A0A0B4J262 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms