Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TRAV9-2A0A087WT02 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV9-2A0A087WT02 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 AC091799.1-201ENST00000422823 811 ntBASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 AC100791.3-201ENST00000617619 330 ntBASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 AC126763.1-201ENST00000552015 2118 ntBASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TRAV9-2A0A087WT02 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 AC018695.7-201ENST00000624587 2492 ntBASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 TSPY6P-201ENST00000448518 926 ntBASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 AC104771.1-201ENST00000603335 964 ntBASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 AC133041.1-202ENST00000642053 222 ntBASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAV9-2A0A087WT02 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRAV9-2A0A087WT02 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms