Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 YBX1P10-201ENST00000444752 975 ntBASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 AC231657.2-201ENST00000624556 255 ntBASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 AC008764.6-201ENST00000595909 2069 ntBASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV18A0A075B6X5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV18A0A075B6X5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV18A0A075B6X5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TRAV18A0A075B6X5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.21■□□□□ 0.18
TRAV18A0A075B6X5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
TRAV18A0A075B6X5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV18A0A075B6X5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 AC005181.1-201ENST00000604782 1256 ntBASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV18A0A075B6X5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 AC073210.2-201ENST00000430369 194 ntBASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 AC005829.2-201ENST00000571422 1056 ntBASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAV18A0A075B6X5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAV18A0A075B6X5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms