Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 HYI-210ENST00000486909 905 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 AC022211.2-201ENST00000585075 2527 ntBASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRBV20-1A0A075B6N2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC12.58□□□□□ -0.39
TRBV20-1A0A075B6N2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 KRT8P36-201ENST00000489121 1440 ntBASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV20-1A0A075B6N2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.57□□□□□ -0.4
TRBV20-1A0A075B6N2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms