Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 ITM2C-210ENST00000620962 501 ntBASIC17.83■□□□□ 0.44
GPC6Q9Y625 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GPC6Q9Y625 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC6Q9Y625 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GPC6Q9Y625 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GPC6Q9Y625 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GPC6Q9Y625 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GPC6Q9Y625 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 AC233263.1-201ENST00000578059 224 ntBASIC17.82■□□□□ 0.44
GPC6Q9Y625 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GPC6Q9Y625 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.82■□□□□ 0.44
GPC6Q9Y625 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 KRT18P29-201ENST00000397031 1267 ntBASIC17.81■□□□□ 0.44
GPC6Q9Y625 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 RN7SL471P-201ENST00000580476 299 ntBASIC17.81■□□□□ 0.44
GPC6Q9Y625 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.81■□□□□ 0.44
GPC6Q9Y625 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GPC6Q9Y625 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.81■□□□□ 0.44
GPC6Q9Y625 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 AC239809.2-201ENST00000415381 517 ntBASIC17.8■□□□□ 0.44
GPC6Q9Y625 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GPC6Q9Y625 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
GPC6Q9Y625 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms