Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SNX11Q9Y5W9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 AL645929.1-201ENST00000420084 975 ntBASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 NPAP1P7-201ENST00000613027 823 ntBASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNX11Q9Y5W9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 AC034232.1-201ENST00000506026 1064 ntBASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 ZNF815P-204ENST00000434898 1737 ntBASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 TREX1-205ENST00000625293 1783 ntBASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SNX11Q9Y5W9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SNX11Q9Y5W9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.64■□□□□ 0.58
SNX11Q9Y5W9 GPAT2P1-201ENST00000444924 1672 ntBASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 TSPY21P-201ENST00000433481 731 ntBASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 AC024243.1-201ENST00000609234 778 ntBASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX11Q9Y5W9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX11Q9Y5W9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms