Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA9Q9Y5G4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 AC004408.2-201ENST00000623613 2777 ntBASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 AC005332.7-201ENST00000614046 2005 ntBASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
PCDHGA9Q9Y5G4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 CLEC4GP1-201ENST00000596555 870 ntBASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 HYMAI.1-201ENST00000620949 238 ntBASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 AL691432.3-201ENST00000621860 400 ntBASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PCDHGA9Q9Y5G4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 LETM1P2-201ENST00000597330 2178 ntBASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 AC009237.14-201ENST00000609975 1594 ntBASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 GCSHP2-201ENST00000560971 527 ntBASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHGA9Q9Y5G4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.58■□□□□ 0.41
PCDHGA9Q9Y5G4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA9Q9Y5G4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHGA9Q9Y5G4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms