Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGB3Q9Y5G1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
PCDHGB3Q9Y5G1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGB3Q9Y5G1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGB3Q9Y5G1 Z98044.1-201ENST00000632503 1764 ntBASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 LETM1P2-201ENST00000597330 2178 ntBASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 AC093525.10-201ENST00000625130 1569 ntBASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 AC135050.7-201ENST00000624508 2218 ntBASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 SNORA78-201ENST00000459373 127 ntBASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 SDHAP1-207ENST00000440850 2000 ntBASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 AC090164.3-201ENST00000610780 2143 ntBASIC17.89■□□□□ 0.45
PCDHGB3Q9Y5G1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 AL160286.2-201ENST00000567150 934 ntBASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 MIR4785-201ENST00000585005 73 ntBASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGB3Q9Y5G1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHGB3Q9Y5G1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms