Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 AL358472.4-201ENST00000633140 710 ntBASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB2Q9Y5E7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 AL359075.1-203ENST00000462729 1002 ntBASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 NEK4P2-201ENST00000580004 1012 ntBASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 AC141586.3-201ENST00000562166 1838 ntBASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
PCDHB2Q9Y5E7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 CR769767.2-201ENST00000622735 460 ntBASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 TEX21P-204ENST00000641479 1693 ntBASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB2Q9Y5E7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 AC091076.1-201ENST00000610741 619 ntBASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PCDHB2Q9Y5E7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 GPAT2P1-201ENST00000444924 1672 ntBASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PCDHB2Q9Y5E7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms