Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 AC004264.1-201ENST00000608354 794 ntBASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF6Q9Y4K3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 AC142086.2-201ENST00000569753 217 ntBASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 KRT8P41-201ENST00000533985 1514 ntBASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 ABALON-201ENST00000629058 1903 ntBASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAF6Q9Y4K3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 UNC93B5-201ENST00000530315 699 ntBASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF6Q9Y4K3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 HEIH-201ENST00000623091 1652 ntBASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 RCC2P6-201ENST00000526625 1557 ntBASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAF6Q9Y4K3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms