Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RCL1Q9Y2P8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RCL1Q9Y2P8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RCL1Q9Y2P8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.42■□□□□ 0.06
RCL1Q9Y2P8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 CNN2P6-201ENST00000439038 900 ntBASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RCL1Q9Y2P8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.4■□□□□ 0.06
RCL1Q9Y2P8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms