Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP20Q9Y2K6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP20Q9Y2K6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP20Q9Y2K6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP20Q9Y2K6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP20Q9Y2K6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.69■□□□□ 0.9
USP20Q9Y2K6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP20Q9Y2K6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 DUX4L26-201ENST00000489078 1255 ntBASIC20.67■□□□□ 0.9
USP20Q9Y2K6 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 WWOX-216ENST00000569818 525 ntBASIC20.67■□□□□ 0.9
USP20Q9Y2K6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 CR769767.2-201ENST00000622735 460 ntBASIC20.67■□□□□ 0.9
USP20Q9Y2K6 AL023973.1-201ENST00000624619 620 ntBASIC20.67■□□□□ 0.9
USP20Q9Y2K6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 KRT8P3-201ENST00000519669 1449 ntBASIC20.67■□□□□ 0.9
USP20Q9Y2K6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP20Q9Y2K6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 AL049597.2-201ENST00000565575 961 ntBASIC20.66■□□□□ 0.9
USP20Q9Y2K6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.66■□□□□ 0.9
USP20Q9Y2K6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 AL512353.2-201ENST00000448759 1962 ntBASIC20.65■□□□□ 0.9
USP20Q9Y2K6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 AC036111.1-201ENST00000533973 1582 ntBASIC20.65■□□□□ 0.9
USP20Q9Y2K6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP20Q9Y2K6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms