Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 AIRN-201ENST00000601203 4374 ntBASIC19.92■□□□□ 0.78
CDH9Q9ULB4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 HOMER2P1-201ENST00000455653 964 ntBASIC19.92■□□□□ 0.78
CDH9Q9ULB4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 NTF6B-201ENST00000591913 560 ntBASIC19.92■□□□□ 0.78
CDH9Q9ULB4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH9Q9ULB4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 AC092647.4-201ENST00000457211 535 ntBASIC19.91■□□□□ 0.78
CDH9Q9ULB4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH9Q9ULB4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 MIR564-202ENST00000385049 94 ntBASIC19.9■□□□□ 0.78
CDH9Q9ULB4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 GCSHP2-201ENST00000560971 527 ntBASIC19.9■□□□□ 0.78
CDH9Q9ULB4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH9Q9ULB4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CDH9Q9ULB4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CDH9Q9ULB4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 ARMC10P1-201ENST00000313754 855 ntBASIC19.89■□□□□ 0.77
CDH9Q9ULB4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 AL049812.1-201ENST00000432563 2267 ntBASIC19.89■□□□□ 0.77
CDH9Q9ULB4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH9Q9ULB4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms