Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 TUBB8P6-201ENST00000436895 1288 ntBASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 AC092368.3-202ENST00000574180 1591 ntBASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 AC073592.3-201ENST00000625118 1834 ntBASIC19.86■□□□□ 0.77
SMARCAL1Q9NZC9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 MYC-209ENST00000641252 345 ntBASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCAL1Q9NZC9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 AC008764.6-201ENST00000595909 2069 ntBASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCAL1Q9NZC9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 TSPY23P-201ENST00000440136 739 ntBASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 AC083880.1-201ENST00000608266 535 ntBASIC19.83■□□□□ 0.77
SMARCAL1Q9NZC9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCAL1Q9NZC9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCAL1Q9NZC9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
SMARCAL1Q9NZC9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCAL1Q9NZC9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCAL1Q9NZC9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.83■□□□□ 0.76
SMARCAL1Q9NZC9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms