Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 TSPY14P-201ENST00000303979 915 ntBASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.31■□□□□ 0.36
SDHAF3Q9NRP4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SDHAF3Q9NRP4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 AC087499.1-201ENST00000418141 1075 ntBASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 AL353719.1-201ENST00000566847 864 ntBASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 AC020763.4-201ENST00000623414 4170 ntBASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SDHAF3Q9NRP4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 LINC01568-207ENST00000641790 1380 ntBASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 KRT18P22-201ENST00000402024 1347 ntBASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 AC010653.2-201ENST00000623505 997 ntBASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.28■□□□□ 0.36
SDHAF3Q9NRP4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms