Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.25■□□□□ 0.83
SIX2Q9NPC8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 REXO1L10P-201ENST00000615707 1290 ntBASIC20.24■□□□□ 0.83
SIX2Q9NPC8 REXO1L12P-201ENST00000622156 912 ntBASIC20.24■□□□□ 0.83
SIX2Q9NPC8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX2Q9NPC8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIX2Q9NPC8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX2Q9NPC8 DGCR10-201ENST00000609839 495 ntBASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms