Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.64□□□□□ -0.39
SND1-IT1Q9HBX3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 CNN2P6-201ENST00000439038 900 ntBASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 AC137761.2-201ENST00000561729 223 ntBASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 AC145350.3-201ENST00000569033 163 ntBASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SND1-IT1Q9HBX3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SND1-IT1Q9HBX3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SND1-IT1Q9HBX3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms