Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 AC018553.1-201ENST00000616682 1458 ntBASIC18.65■□□□□ 0.58
POLR1BQ9H9Y6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
POLR1BQ9H9Y6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
POLR1BQ9H9Y6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 TSPY5P-201ENST00000426936 936 ntBASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 MFAP1P1-201ENST00000442257 1255 ntBASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 YBX1P2-201ENST00000489612 999 ntBASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 AP000550.4-202ENST00000639755 178 ntBASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 AC007613.1-201ENST00000572811 2597 ntBASIC18.64■□□□□ 0.57
POLR1BQ9H9Y6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 COX11P1-201ENST00000489116 835 ntBASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 KRT18P56-201ENST00000507275 550 ntBASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 AC010653.2-201ENST00000623505 997 ntBASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 AC096733.2-201ENST00000609937 1394 ntBASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1BQ9H9Y6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 FAM207BP-201ENST00000447172 505 ntBASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1BQ9H9Y6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms