Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.78■□□□□ 0.76
SMOQ99835 NEK4P2-201ENST00000580004 1012 ntBASIC19.78■□□□□ 0.76
SMOQ99835 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMOQ99835 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.78■□□□□ 0.76
SMOQ99835 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.78■□□□□ 0.76
SMOQ99835 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.78■□□□□ 0.76
SMOQ99835 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMOQ99835 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.78■□□□□ 0.76
SMOQ99835 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMOQ99835 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMOQ99835 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMOQ99835 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.77■□□□□ 0.76
SMOQ99835 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.77■□□□□ 0.76
SMOQ99835 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SMOQ99835 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SMOQ99835 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.77■□□□□ 0.76
SMOQ99835 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 RNF152P1-201ENST00000397754 604 ntBASIC19.77■□□□□ 0.76
SMOQ99835 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.77■□□□□ 0.76
SMOQ99835 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.77■□□□□ 0.76
SMOQ99835 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.77■□□□□ 0.76
SMOQ99835 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.77■□□□□ 0.76
SMOQ99835 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.77■□□□□ 0.76
SMOQ99835 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SMOQ99835 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SMOQ99835 HEIH-201ENST00000623091 1652 ntBASIC19.77■□□□□ 0.76
SMOQ99835 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMOQ99835 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.77■□□□□ 0.75
SMOQ99835 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMOQ99835 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SMOQ99835 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMOQ99835 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMOQ99835 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SMOQ99835 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.76■□□□□ 0.75
SMOQ99835 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMOQ99835 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMOQ99835 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SMOQ99835 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.76■□□□□ 0.75
SMOQ99835 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMOQ99835 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 TSPY5P-201ENST00000426936 936 ntBASIC19.76■□□□□ 0.75
SMOQ99835 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.76■□□□□ 0.75
SMOQ99835 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SMOQ99835 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.76■□□□□ 0.75
SMOQ99835 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SMOQ99835 AC140113.3-201ENST00000605663 199 ntBASIC19.76■□□□□ 0.75
SMOQ99835 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.76■□□□□ 0.75
SMOQ99835 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
SMOQ99835 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.76■□□□□ 0.75
SMOQ99835 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.76■□□□□ 0.75
SMOQ99835 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMOQ99835 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.75■□□□□ 0.75
SMOQ99835 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.75■□□□□ 0.75
SMOQ99835 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMOQ99835 MIR564-202ENST00000385049 94 ntBASIC19.75■□□□□ 0.75
SMOQ99835 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.75■□□□□ 0.75
SMOQ99835 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.75■□□□□ 0.75
SMOQ99835 AC063952.2-201ENST00000498792 1227 ntBASIC19.75■□□□□ 0.75
SMOQ99835 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.75■□□□□ 0.75
SMOQ99835 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.75■□□□□ 0.75
SMOQ99835 AL031432.5-201ENST00000641059 760 ntBASIC19.75■□□□□ 0.75
SMOQ99835 AC083906.6-201ENST00000641366 219 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms